PATHOLOGY & LABORATORY MEDICINE

Molecular Pathology Laboratory Management

Oct 29, 2016 by in PATHOLOGY & LABORATORY MEDICINE Comments Off on Molecular Pathology Laboratory Management

Application Considerations Genetics Ethical issues (presymptomatic and prenatal testing) Consequences for family members Informed consent requirements Requirements for family-related information (ethnicity, pedigree, specimens) Time sensitivity (prenatal diagnosis) Complex risk-assessment calculations…

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Hepatitis B and C Viruses

Oct 29, 2016 by in PATHOLOGY & LABORATORY MEDICINE Comments Off on Hepatitis B and C Viruses

Characteristic Hepatitis B virus Hepatitis C virus Type of virus Hepadnavirus Hepacivirus Viral genome 3.2 kb, relaxed circular, partially double-stranded DNA 9.5 kb, positive-sense, single-stranded RNA Routes of transmission Parenteral…

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Urothelial Carcinoma

Oct 29, 2016 by in PATHOLOGY & LABORATORY MEDICINE Comments Off on Urothelial Carcinoma

Figure 34.1 Genetic pathways for urothelial carcinoma tumorigenesis. Noninvasive papillary tumors are characterized by early activating mutations of the FGFR3 gene, inactivating mutations or epigenetic alterations of the P16 gene,…

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Developmental Delay: Gene Testing

Oct 29, 2016 by in PATHOLOGY & LABORATORY MEDICINE Comments Off on Developmental Delay: Gene Testing

Allele type Repeat range Methylation status Normal 5–44 Not methylated Intermediate/gray zone 45–54 Not methylated Premutation 55–200 Not methylated Full mutation >200 Methylated Methylation mosaic >200 Variable methylation Premutation/full-mutation mosaic…

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Sexually Transmitted Diseases

Oct 29, 2016 by in PATHOLOGY & LABORATORY MEDICINE Comments Off on Sexually Transmitted Diseases

Manufacturer Assay method Sample preparation Amplification strategy Detection strategy Contamination controls IC Becton Dickinson SDA DNA extraction via para-magnetic particle technology Target Fluorescence Closed System Yes Routine environmental monitoring suggested…

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Bacterial Infections

Oct 29, 2016 by in PATHOLOGY & LABORATORY MEDICINE Comments Off on Bacterial Infections

Figure 49.1 Schematic of MALDI-TOF mass spectrometry for differentiation of two organisms (A and B). Differences in DNA (1) encode for different protein products (2) which are differentially fragmented under…

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Deafness

Oct 29, 2016 by in PATHOLOGY & LABORATORY MEDICINE Comments Off on Deafness

Sample evaluation—targeted genomic enrichment Sample ID 112111-3 Phenotype High-frequency SNHL Exons targeted 1,357 Bases targeted 351,522 base pairs Metric Result (reference range) Total reads 28.2 million (14–32 million) % Reads…

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