CHAPTER 7 Oesophagus and gastrointestinal tract
Chapter contents
Introduction
Following the introduction of fibreoptic endoscopy, our knowledge of the gastrointestinal tract has changed, because we now have direct viewing and sampling of lesions. The pathological classification of gastrointestinal lesions is based on morphological criteria derived from surgical resection and biopsy specimens. Nevertheless, cytology can be very useful in the appropriate clinical context and, provided that the optimal sampling method for the particular clinical setting is chosen. Gastroenterologists may not be aware of the usefulness of cytology in this area so care must be taken that it is used in the appropriate clinical context with an understanding of the limitations of this approach (Box 7.1).
Nowadays, better sampling methods and cytological preparations can improve the sensitivity and specificity of the diagnosis of gastrointestinal lesions. Large lesions are more thoroughly sampled with a cytological brush passed through the endoscope, a less traumatic, easier and cheaper methodology. Lesions covered with normal mucosa or localised within the gut wall can be reached by fine needle aspiration (FNA) with or without endoscopic ultrasonographic (EUS) control.1 Throughout the upper and lower gastrointestinal tract there are degenerative, inflammatory and neoplastic lesions that may be separately diagnosed by careful morphological study. Lesions such as lymphoma and gastrointestinal stromal tumours (GIST) can be reached by EUS-FNA needle.2 The material obtained can be divided for direct preparations, cell blocks or liquid based cytology (LBC). Flow cytometry, molecular biology techniques and immunocytochemistry (ICC) can also be applied.
Normal anatomy and histology
The oesophagus
The oesophagus begins at the cricoid cartilage (15 cm endoscopic length), passes within the posterior mediastinum and through the diaphragm where it extends for several centimetres, having a total length of about 40 cm from the incisors. Four layers characterise the gastrointestinal tract wall: mucosa, submucosa, muscularis propria and serosa. In the oesophagus, however, all four layers are only present in short abdominal and thoracic segments.3 Each of these layers may have their own lesions but the mucosa is particularly exposed to external stimuli. Oesophageal mucosa consists of a non-keratinising stratified squamous epithelium, lamina propria and muscularis mucosae. The squamous epithelium is divided in three layers: basal cell, prickle cell (intermediate cells) and functional or superficial cell layer. There are normally also a few mononuclear cells, not classifiable by routine methods.
The stomach
The stomach is a very distensible organ located in the left upper quadrant of the abdomen, between the oesophagus and the duodenum. Gastric mucosa consists of a superficial epithelium forming foveolae and a deeper layer of glands that empty into the base of the foveolae. The superficial cells are tall, columnar and mucus secreting with basally located nuclei. Glands differ in structure and function along the gross anatomical regions. Cardiac and pyloric (antral) glands are mucus secreting, with microvacuolated cytoplasm similar to Brunner’s glands. Three types of cells are present in the fundic gland mucosa: zymogenic cells, which are cuboidal, basally located in the gland with a central nucleus and pale cytoplasm; parietal cells, triangular with centrally placed nuclei and dense cytoplasm; and mucous neck cells. Along with these are scattered endocrine cells, mostly located in the glands.4
The duodenum
The duodenum is the most proximal segment of the small intestine and is, except proximally, a fixed retroperitoneal organ closely related to adjacent organs and structures. It surrounds the head of the pancreas and is divided in four portions: first or bulb, second or descending, third or horizontal and fourth or ascending. It ends at the angle of Treitz where the jejunum begins, at the level of the second lumbar vertebra. The common bile duct and the major and minor pancreatic ducts empty into the second portion through several anatomical variations, the ampulla of Vater being the major identifiable structure. Duodenal mucosa is poorly demarcated from gastric mucosa. In the first few millimetres it is antral in type, identical to gastric pyloric mucosa. Other areas are intestinal villous in type, covered by columnar absorptive cells with some goblet cells: and there are areas of transitional type where both are found. This transition extends for about 5 mm, beyond which the presence of pyloric type epithelium is referred to as gastric metaplasia. Submucosal Brunner’s glands are lobular collections of tubulo-alveolar glands that sometimes extend to the deeper portions of the mucosa. These characterise the duodenal segment as they disappear towards the jejunum. The mucus secreting cells are cuboidal with pale cytoplasm and an oval nucleus located at the base. Also some scattered neuroendocrine cells can be seen.5
The colon
The colon is the terminal segment of the gastrointestinal tract. The last portion is the rectum which enters the pelvis ending at the anal canal. Colonic superficial epithelial lining is composed of columnar cells covered by a layer of mucin, enzymes, lectins and glycans that form the glycocalyx. Crypts extend perpendicularly to the muscularis mucosae. Goblet cells, absorptive columnar cells, endocrine, Paneth and M cells line these structures. Also, lymphoid follicles are scattered along the colon with normal variations along it. Cellular turnover is highest in colonic mucosa, so apoptotic and mitotic cells can easily be found.6
The anal canal
The anal canal has different lengths depending on whether it is defined anatomically or by histology (average 4.2 and 3 cm, respectively). Histologically four zones are described that can easily be seen on longitudinal sections and less easily macroscopically – the colorectal zone lined by intestinal type epithelium, the transitional zone lined by epithelial variants, the squamous zone lined by uninterrupted squamous epithelium, and the perianal skin and skin appendages. The macroscopic landmark is the dentate line, which is an important anatomical definition for common ground between clinicians and pathologists. It roughly corresponds to the transitional and squamous zone gathering point, varying in length around the circumference. Anal glands open in the transitional zone and can extend even to the external sphincter. The cells lining the different anatomical areas range from the intestinal type, already described, to the transitional type similar to urothelium, and squamous cells. Scattered Merkel and neuroendocrine cells, melanocytes and Langerhans cells are also found. Skin appendages include sebaceous, apocrine and sweat glands and hair.7
Cytology sampling methods and preparation
Cells can be obtained through different sampling methods and a close dialogue with the endoscopists and knowledge of the clinical setting should influence the choice of method. Cytological sampling should be taken prior to any biopsy8 and the main methods used include the following:
General principles
One should always apply the principle of getting as much information as one can to establish a good rapport with clinicians and endoscopists. This is particularly important when dealing with EUS-FNA. Smears can be evaluated on site, which improves the cell yield and avoids repeating procedures later.13
Pitfalls
Oesophagus
Normal cytological findings
The normal components of oesophageal cytology are the superficial and intermediate cells of the multilayered squamous epithelium. Oesophageal brush smears in the absence of disease are usually paucicellular. Superficial cells are eosinophilic while intermediate cells are more basophilic, both having voluminous delicate cytoplasm. The nucleus is pyknotic in the more mature cells while in the intermediate type it is slightly larger and the cytoplasm is finely granular. On vigorous sampling, parabasal cells can be present, having larger darker nuclei and basophilic cytoplasm. Sheets, clusters and pearl-like arrangements can be seen. Glandular cells from the gastric epithelium are often seen and should not raise the possibility of Barrett’s oesophagus (Fig. 7.1). Oral bacteria, sometimes overlying superficial squamous cells from the oral mucosa, food contaminants and respiratory cells can also be seen (Box 7.2).
Inflammatory conditions
Inflammation induces a cellular response that can be morphologically worrisome. Cells from the basal layer along with the more superficial layers can appear isolated or in small groups reflecting regenerative epithelium (Fig. 7.2). Injury can be induced by infections, local action of chemicals and radiation.
Reflux (peptic) oesophagitis
Cytological findings: reflux (peptic) oesophagitis
Barrett’s oesophagus
Barrett’s oesophagus, a complication of chronic gastro-oesophageal reflux disease, is a pre-malignant condition for adenocarcinoma of the oesophagus and the oesophago-gastric junction. In the definition of the American College of Gastroenterology, Barrett’s oesophagus is a change in the oesophageal epithelium of any length that can be recognised at endoscopy and is confirmed to have intestinal metaplasia by biopsy (Fig. 7.4). Three types of epithelium are recognised in Barrett’s metaplasia: oxyntico-cardiac, cardiac and intestinal. Oxyntico-cardiac and cardiac types are identical to the corresponding gastric epithelial regions and one should be cautious in rendering a diagnosis of Barrett’s metaplasia in lower oesophagus samples.
Cytological findings: Barrett’s oesophagus
Radiation changes
Radiation induced lesions are similar to those of the uterine cervix. Irradiation of the chest and mediastinum may be used in conjunction with chemotherapy. Lesions are dose related but some variation in individual susceptibility exists.17 These lesions pose diagnostic problems with malignancy (Box 7.3). Enlarged cytoplasm and nucleus maintain a roughly normal N:C ratio. There are degenerative changes with cytoplasm and nuclear vacuolation, pyknosis or pale staining nucleus and regenerative changes with mitotic activity.
Cytological findings: radiation changes
Infections
Candida sp. and other fungi
Candida infection is the most frequent infection of the oesophagus. It has a typical endoscopic picture and on cytology variable amounts of yeast can readily be identified on H&E and Papanicolaou stains or with PAS and silver stains (Fig. 7.8). The epithelial cells are reactive with amphophilic squamous cells, parakeratotic whirls and increased granular layer squames. In HIV-positive patients, intense oesophageal candidiasis can occur and can be the first manifestation of the disease (Fig. 7.9).
Cytological findings: candida sp. and other fungi
Rarely, other fungi such as Mucor, Histoplasma and Actinomyces spp. can produce oesophageal infections. Actinomycosis is an opportunistic infection, causing large ulcers. Sulphur granules characterise the morphology, as at other sites (Fig. 7.10).
Viral infections
Herpes simplex virus infection can present with vesicles or well-demarcated ulcers, and lesions are seen in otherwise healthy individuals as well as immunosuppressed patients. Clinically, the plaque-like ulcerative slough is usually mistaken for Candida. Cytologically, the typical herpetic nuclear inclusions may be more difficult to identify unless immunocytochemistry or in situ hybridisation is used to highlight the cells. Otherwise they typically induce multinucleation with moulding, eosinophilic or basophilic intranuclear inclusions and ground glass nuclei (Fig. 7.11).
Cytological findings: herpes simplex virus
Malignant neoplasms
Squamous cell carcinoma
The microscopic appearance of squamous tumours is similar to that in other sites. Papanicolaou stain is optimal cytologically to demonstrate the bright keratinised orangeophilic cytoplasm (Fig. 7.12). The chromatin can vary from coarse and hyperchromatic to pyknotic in appearance. Anucleated keratinised squamous cells may also be present. In less-differentiated tumours, scattered isolated cells with more cyanophilic cytoplasm, enlarged nuclei and more apparent nucleoli are commonly seen (Fig. 7.13).