Introduction to Metabolic Pathways

Chapter 20 Introduction to Metabolic Pathways


The metabolic activities of cells are dictated by two major concerns:





Therefore an unsuspecting nutrient molecule entering a cell has two alternative fates: either it becomes incorporated into a cellular macromolecule or it is oxidized for the generation of ATP.


The biosynthesis of cellular macromolecules has to be balanced by their degradation (pathway image in Fig. 20.1). Under steady-state conditions, the rates of synthesis and degradation are balanced and the amount of the macromolecule remains constant. Different nutrients can also be interconverted through metabolic intermediates. For example, most amino acids can be converted to glucose, and glucose can be converted to amino acids and fatty acids (pathways image and image in Fig. 20.1).






Free energy changes in metabolic pathways are additive


Complex metabolic transactions, such as the synthesis of glucose from lactate and the oxidation of lactate to carbon dioxide and water, cannot occur in a single step. They require a whole sequence of reactions that form a metabolic pathway. The direction in which the pathway proceeds depends on the sum of the free energy changes of the individual reactions. Consider the simple pathway:



where ΔG0′ = standard free energy change, and PPi = inorganic pyrophosphate. Two of the three reactions have an unfavorable equilibrium with a positive ΔG0′. Nevertheless, the sum of the free energy changes is negative at −6.7 kcal/mol. Therefore, under standard conditions, the pathway will turn ethanol into acetyl coenzyme A (acetyl-CoA) rather than turn acetyl-CoA into ethanol.


However, the actual free energy change is quite different from the standard free energy change. For example, reaction (1) has a very unfavorable equilibrium. With equal concentrations of NAD+ and NADH, there would be only one molecule of acetaldehyde at equilibrium for every 10,000 molecules of ethanol (see Chapter 4)! However, under aerobic conditions, [NAD+] is always far higher than [NADH]. When NAD+

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Jun 18, 2016 | Posted by in BIOCHEMISTRY | Comments Off on Introduction to Metabolic Pathways

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