MassCPR: Research Collaboration to Confront a Pandemic



MassCPR: Research Collaboration to Confront a Pandemic


M. William Lensch

Arlene H. Sharpe

Bruce D. Walker

Howard M. Heller

George Q. Daley

David E. Golan



INTRODUCTION

In January of 2020 public health officials began warning that a virulent new respiratory illness caused by a novel coronavirus was spreading in multiple countries and threatening to evolve into a global pandemic. Harvard University quickly mobilized its leadership and, soon thereafter, the regional biomedical community to formulate and fund a research and clinical response to this new pathogen, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), and the disease, coronavirus disease 2019 (COVID-19). A consortium of 18 different institutions rapidly convened, involving investigators and clinicians at all four Massachusetts medical schools (Harvard, Boston University, Tufts, and the University of Massachusetts), their affiliated hospitals and research institutes, the Massachusetts Institute of Technology (MIT), and colleagues from local foundations, government agencies, and biotechnology companies. This entity, the Massachusetts Consortium on Pathogen Readiness (MassCPR, https://masscpr.hms.harvard.edu/), was an unprecedented effort to marshal a coordinated response to an emerging public health calamity. In its first three years, MassCPR investigators have been responsible for numerous advances in understanding disease transmission,
pathogenesis, immunity, and clinical management, and consortium members have played major roles in the scientific formulation and clinical testing of the Moderna and Janssen/J&J vaccines. MassCPR has pioneered an organizational structure that encourages scientists to work with a more open, collaborative, and less competitive spirit by fostering partnerships that reward generation of transformative knowledge for the benefit of humanity. This chapter highlights the organization, outcomes, and lessons learned from MassCPR’s first phase and sets the stage for ensuring greater preparedness for future public health threats.


FRAMING THE CRISIS AND THE CALL FOR A RESPONSE

Two days after the first case of the “2019 novel coronavirus” was confirmed in Massachusetts,1 a group of Harvard University faculty and administrators gathered on February 3, 2020, in a small conference room for a live video conference with faculty at the Guangzhou Institute of Respiratory Health (GIRH) in Guangdong Province, China. The group in China was led by Dr. Zhong Nanshan, internationally known for his role in managing the SARS outbreak years earlier.2 The connection to our international colleagues at GIRH would remain an important communication channel for many months to come, as we openly exchanged critical knowledge regarding clinical management and approaches to pandemic-related research. The meeting with GIRH had been arranged by the China Evergrande Group, a corporation that had supported multiple academic programs at Harvard,3 including the Evergrande Center for Immunologic Diseases, a joint endeavor involving Harvard Medical School (HMS) and Brigham and Women’s Hospital (see: https://evergrande.hms.harvard.edu/home).

Over the course of several hours during our February 3rd meeting, the physicians and researchers at GIRH relayed a harrowing tale of massive numbers of patients in Wuhan, Hubei Province, succumbing to a previously unencountered, highly aggressive coronavirus-mediated pneumonia bearing similarities to SARS, but with distinct features. Already, widespread lockdowns were in place across Hubei, but the number of deaths was rising, and area healthcare systems were operating in a mode of crisis standards of care.

Beyond relaying first-hand information about the evolving urgency in China, the GIRH medical team was seeking assistance with interpreting unique clinical features and findings and recruiting international colleagues to turn their attention to the rapid development of diagnostics, therapeutics, and vaccines. Affected persons in China needed immediate assistance, and they warned it was likely only a matter of time before the disease would become rampant in other parts of the world. The China Evergrande Group provided funding to launch urgent, COVID-19-related research and clinical management endeavors at both GIRH and Harvard.4

During the next three weeks, the Harvard leadership team began contacting colleagues across the greater Boston biomedical community in the fields of infectious disease, virology, pulmonology, immunology, pathology, vaccine development, diagnostics, and other areas of research and clinical practice at all four Massachusetts medical schools, their academic medical centers and research institutes, in key nodes of activity at departments of public health and national/international research organizations, and within the private sector. It soon became clear that, although a small but growing number of clinicians, researchers, and individuals previously working in other fields were turning their attention to what was at that time still known as nCoV-2019, no organizing body existed to synergize efforts and support operational efficiency among groups and institutions. A coordinating center had the potential to capitalize on the enormous talent in our region by serving as a convener as well as a clearinghouse of information, funding, and reagents to accelerate pandemic-related medical research and development. Simultaneously, we began an effort to procure significant philanthropic funding to catalyze the research efforts that would be required.

On March 2, 2020, the date on which the second case of COVID-19 was identified in Massachusetts,5 nearly 100 individuals gathered at HMS for a half-day scientific workshop6 to review current information and to organize a coordinated effort (Figure 18.1). The workshop convened top scientists and clinical care experts from Harvard, its affiliated teaching hospitals and research institutes, MIT, Boston University, Tufts University, the University of Massachusetts-Worcester, the
Gates Medical Research Institute, the Massachusetts Department of Public Health, and several biotechnology and pharmaceutical companies. The gathering was likely the first time the greater Boston biomedical community had assembled in such numbers to collectively confront an emerging threat. March 2nd would also mark the one and only time the group met in-person over a roughly two-and-a-half-year period, as social distancing and campus shutdowns rapidly ensued across the region and the world. The March 2nd meeting was the genesis of what would soon thereafter be dubbed the “Massachusetts Consortium on Pathogen Readiness,” with HMS as the central coordinating and funding institution.







ORGANIZING THE EFFORT

Scientific workshops and symposia typically involve many months of advance preparation, mapping of themes and sessions, scheduling of speakers, booking venues and support services, and attending to all the other details that make for an effective and informative experience. Facing the urgency of a looming pandemic, however, there was little time for extensive workshop planning. We would have to build it as we went along.

In anticipation of the March 2, 2020, workshop, thought was given to features and approaches that were likely to dominate the coming pandemic. These included clinical management, diagnostics, epidemiology, pathogenesis, therapeutics, and vaccines.

These broad categories served as organizing themes for individual, 30-minute plenary sessions that were led by teams of two subject matter experts. Each plenary coleader kicked off their individual session by offering a brief set of framing comments based on their expertise as well as the
current state of pandemic-related knowledge. Open discussion followed on each plenary topic, in which individuals throughout the larger room shared their most pressing questions, observations, and predictions. The urgency of the situation was made clear by the presence of our GIRH colleagues participating by video feed.

After these plenary sessions, workshop participants were invited to self-assemble at one of six large tables representing the thematic areas. Each table hosted a simultaneous, live discussion from which a basic framework emerged that mapped out the essential elements to be initially considered/undertaken within each thematic area. These six areas would later become the core working groups (WGs) of the MassCPR (see later), each representing a principal area of focus that continues to define our efforts to this day.

As the simultaneous sessions were underway, three of us in the HMS administration gathered in the back of the room to discuss what we were seeing and hearing. A few things were apparent. First, the discussions at each of the tables were intense and engaging. It was clear that exceptional talent and experience had been assembled in the room and a collective commitment to working together was emerging. Every conversation we had heard was accomplishing exactly what we hoped—to identify the most pressing elements of focus within each thematic area.

It rapidly became clear that the effort needed an organizing structure that would endure beyond the day’s session so that the nascent working relationships emerging across the room could be nurtured and supported, both materially and intellectually, throughout the coming pandemic. Although those of us who were gathered in our mid-meeting “huddle” had a great deal of combined experience in establishing and operating biomedical research–related endeavors, none of us had previously organized anything with the multi-institutional scale envisioned, especially given the short timeline before us. The situation was unprecedented. At that moment, we needed only to commit ourselves to try. The group emerged from the meeting with an organizational structure and a plan for launching arguably the most rapid (and far-reaching) request for proposals (RFPs) in our institution’s history.

The MassCPR partnering institutions are:



  • Beth Israel Deaconess Medical Center (BIDMC)


  • Boston Children’s Hospital (BCH)


  • Boston University (BU)


  • Boston Medical Center (BMC)


  • Brigham and Women’s Hospital (BWH)


  • Broad Institute of MIT and Harvard


  • Dana-Farber Cancer Institute (DFCI)


  • Harvard Medical School (HMS) (coordinating institution)


  • Harvard T.H. Chan School of Public Health (HSPH)


  • Massachusetts Eye and Ear Institute (MEEI)


  • Massachusetts General Hospital (MGH)


  • Massachusetts Institute of Technology (MIT)


  • National Emerging Infectious Diseases Laboratory (NEIDL)


  • Ragon Institute of MGH, MIT, and Harvard


  • Tufts Medical Center (TMC)


  • Tufts University (TU)


  • University of Massachusetts Chan Medical School (UMass)


  • Wyss Institute for Biologically Inspired Engineering

The organization and function of MassCPR’s elements will be described in the next section, in part by paraphrasing language contained within an informal consortium agreement that was drafted in the earliest days of MassCPR’s development.



GOVERNANCE STRUCTURE AND OPERATIONS


Executive Committee

From its earliest moments, the MassCPR adopted a streamlined oversight structure with an executive committee (EC) (Figure 18.2) consisting of a chair (George Q. Daley, dean of the Faculty of Medicine, HMS), a vice-chair (David E. Golan, dean for Research Operations and Global Programs, HMS), and two faculty co-leads (Arlene H. Sharpe, chair, Department of Immunology, HMS, and Bruce D. Walker, director of the Ragon Institute of Massachusetts General Hospital, MIT, and Harvard). The EC was staffed by an executive director (M. William Lensch, strategic advisor to the dean, HMS).






The EC is responsible for generating and refining MassCPR’s overall strategic plan, establishing MassCPR’s general principles of operation (in consultation with the steering committee [SC]) and, through the coordinating institution (HMS), ensuring that the consortium has appropriate financial and administrative support to achieve its objectives. For the majority of the pandemic, the EC met weekly to review progress, develop agendas for the upcoming SC meeting, and rapidly respond to issues and opportunities.

The EC is also responsible for the development and implementation of an overarching fundraising strategy (see Securing Funding section), high-level engagement with efforts and investigators
in other locations, and reporting on progress, opportunities, and goals to institutional leadership, private donors, funding organizations, and other parties as needed.


Steering Committee

The faculty members comprising the SC draw from the consortium’s many institutions, each person being deeply involved in COVID-19-related patient care and/or research. The SC (Figure 18.2) is chaired by the faculty co-leads and includes the executive director, the WG co-leads, and other institutional representatives from across the consortium as appropriate and as appointed by the faculty co-leads. The chair and vice-chair of the EC serve as ex officio members of the SC.

The SC provides oversight of the WGs (described later) and functions by supporting the faculty co-leads with planning and oversight of day-to-day operational activities and administration of MassCPR. It recommends policies, operating procedures, and priorities to the EC for review and ratification. The SC plays a particularly significant role in evaluating the overarching canopy of COVID-19-related needs and makes recommendations regarding necessary pivots (on a short timeline) as well as strategic goals (on a longer timeline). For more than 18 months, the SC convened weekly to discuss progress, challenges, and the latest pandemic-related developments.

Past and present members of the MassCPR SC are listed in the Acknowledgments.


Working Groups

Each WG is led by two or more subject matter experts as appointed by the faculty co-leads and composed of faculty from consortium member institutions and related organizations. The initial WGs represented key focus areas relating to COVID-19 and SARS-CoV-2, as follows:



  • Clinical management/acute response (clinical characteristics, infection prevention/control)


  • Diagnostics (viral presence/load, serology, point-of-care testing, capacity)


  • Epidemiology (scope, transmission, modeling)


  • Pathogenesis (animal models, host-pathogen interactions, biomarkers)


  • Therapeutics (small molecules, neutralizing antibodies)


  • Vaccines (multiple platforms/approaches, correlates of immunity)

One year into the pandemic, two additional WGs were added in response to new challenges that emerged during the evolving pandemic:



  • Postacute sequelae of COVID-19 (PASC), that is, “Long COVID”


  • SARS-CoV-2 variants

At the 2-year mark, a formal WG dedicated to the collection and banking of biospecimens was established because of the continuing importance of this vital resource, although coordinated access to biospecimens across the consortium was among the earliest features of MassCPR’s efforts (see “Biosample Acquisition, Banking, and Distribution” section).

WGs are organized to discuss the latest findings, to prioritize strategies and approaches that streamline research progress, and to offer recommendations for resources needed and their related allocation methodologies. The WGs otherwise develop and support research activities related to the individual clinical and scientific focus areas.

Throughout the most pressing months of the pandemic, beyond their standing participation in the SC, each of the WGs convened a weekly video call, routinely welcoming dozens and at times hundreds of individuals to discuss research objectives, progress, and reagents along with whatever information was needed by others to advance their own work. WG calls were typically organized around a rotating schedule of speakers, each offering three to six “lightning talks” lasting no more than 5 to 10 minutes each, followed by a related (open audience) discussion. In this manner, each WG built and supported a closely knit community of investigators and clinicians (see later). Additionally, social media–based communications and organizing platforms such as Slack (https://slack.com/)
proved to be, and remain, highly effective communications tools for WG members.

WGs wrestled with the challenge of how to manage proprietary research data that typically remain confidential prior to publication. In many areas of biomedical research, advances are closely guarded to ensure that investigators receive proper credit for unique discoveries. Moreover, confidentiality ensures that discoveries deemed valuable as intellectual property can be protected by the filing of patents before such results are disclosed publicly. However, the urgency of the pandemic, and the collegial nature of the WGs, compelled attendees to reevaluate their previous approaches.

For example, whereas preliminary research results might ordinarily be shared only within one’s own laboratory or in a closed forum such as a faculty or departmental meeting, the pandemic motivated everyone to reconsider prior norms. WGs were primarily drawn from MassCPR-related organizations, but not entirely so and not all the time. WG leaders and members at times felt that inviting a colleague or collaborator from a campus or organization elsewhere in the world had the potential to accelerate understanding or provide the best possible expertise during a given session. This included faculty members at GIRH, the University of KwaZulu-Natal—Durban, Ospedale San Raffaele—Milano, and other international institutions. It was our general experience that WG calls were open forums.

Researchers and clinicians felt strong incentives to share and assimilate new data as extensively and quickly as possible. Speakers welcomed critique and pushed for the work to progress with a sense of urgency that was palpable. New collaborations were being formed in real time through discussions as well as the open chat mechanism on these group calls. There is no word that better characterizes what we witnessed than trust. If the discussion of a potential therapeutic compound that showed promising results in an unbiased screen was important to highlight, it was highlighted. Even in the pandemic, however, transparency had its limits. When screens yielded a proprietary compound, sometimes the structure was withheld, especially when corporate partners remained committed to proprietary intellectual property protection that might ensure they could secure capital from investors in order to develop potential therapeutics. Otherwise, we encountered few instances wherein guests were excluded or dismissed. WG members generally invited people from their own trusted networks, and other WG members honored that trust. It was remarkable and heartening to behold.


Administrative Core

MassCPR formed and operated as a matrix-style organization with support of a central executive and administrative team, a cadre of 12 to 14 WG leaders, and a massive population of close to 1,000 researchers and clinical care providers at all ranks who were distributed across 18 institutions within the Commonwealth of Massachusetts. The administrative core was primarily organized and led by a team of three individuals who defined operational goals and approaches and distributed work to others: David E. Golan, dean for Research Operations and Global Programs, HMS; David Hwang, chief research operations officer, Office for Research Operations, HMS; and M. William Lensch, strategic advisor to the dean, HMS, who also assumed a role as MassCPR’s executive director.

Though unusual for an institutionally based research undertaking, no individuals formally work for the MassCPR. Even at the level of administration, MassCPR neither had nor currently has formal employees or dedicated full-time equivalents (FTEs). Participation in MassCPR at all levels was voluntary. The core of essential individuals and the extended group of administrative/organizational staff supporting the greater MassCPR effort gave of their time, attention, and talent in addition to their formal obligations at their respective institutions (Figure 18.3). By tabulating the numbers of individual contributors and the estimates for their aggregated effort, we found that the number of total hours contributed over the first 18 months required roughly 12 FTEs to establish and operate MassCPR. What this matrix-style approach lacked in formally defined roles and responsibilities was more than counterbalanced by being nimble. As may be the case with any effective team that assembles in a crisis, the MassCPR administrative core works in a way in which every person with a good idea contributes to strategy, offers solutions to matters arising, and takes on tasks as needed no matter what they are.







The administrative core functions in a variety of ways, including coordination of MassCPR fundraising and stewardship of funds, as well as managing interactions with collaborating institutions, WGs, task forces, RFP processes, targeted funding processes, industry connections, media/press/outreach, events and workshops, IT/databases, and websites and communications. It handles all budgets and grant administration relating to various MassCPR-supporting (ie, funds coming into the organization) and MassCPR-supported (ie, funds provided to researchers by the organization) awards. In this manner, the administrative core provides critical support to not only the scientific research occurring in individual research labs but also the infrastructure needed to support and coordinate consortium-wide science for maximum impact.

These responsibilities include:



  • Strategic coordination and collaboration among all the relevant research institutions within the United States and elsewhere


  • Maintaining regular communications with organizations providing funding to MassCPR, including convening meetings and the preparation of progress reports


  • Implementing RFPs at regular intervals to identify and fund the most innovative and promising projects


  • Planning and execution of symposia, workshops, and other coordinating meetings


  • Developing and maintaining a dedicated communications function, including a website and the coordination of press/media relations


  • Management of financial, research administration, and general administrative aspects of the initiative


  • Ensuring compliance with relevant local and federal laws and regulations pertaining to the approved projects



SECURING FUNDING

Government funding is the backbone of biomedical research nationwide. However, the timelines associated with typical grant composition, submission, review, and awarding are simply incompatible with the nature of a burgeoning crisis like the earliest months of the COVID-19 pandemic. The esprit de corps and research collaborations, as well as the individual and institutional selflessness that defined MassCPR’s rapid response, would not have been possible without philanthropic investments that allowed HMS to quickly distribute funding to the development of shared community resources and to teams of investigators and care providers from across the consortium.

Harvard University took the lead in organizing fundraising efforts, which were joined by other consortium institutions, most notably the Ragon Institute, as each leveraged their networks of long-standing and new supporters to gather the resources needed to implement the plans developed during the March 2nd workshop. Because of the early financial support of the China Evergrande Group6 and others who were MassCPR’s initial contributors, by April 21, 2020, MassCPR had progressed from mapping out areas of initial focus to awarding $17.5 million in total research funding to 63 projects across 15 consortium institutions in its first tranche of awards alone. Including non-consortium institutions that received subawards, 38 total institutions were involved in these projects.

As of May 2021, the MassCPR Donor Honor Roll numbered over 100 individuals, organizations, trusts, foundations, and other types of contributors (see: https://masscpr.hms.harvard.edu/donors). Some contributors gave a million dollars or more, whereas others donated less than one hundred dollars. The generosity shown to MassCPR at all levels of philanthropic support directly enabled the consortium.

The ability to rapidly deploy funding was essential to launching MassCPR’s early activities. Early funding not only directly facilitated COVID-19-related research projects and community resources but, in so doing, poised MassCPR as well as individually funded recipients and groups of recipients to apply for additional, follow-on support from other foundation and government sources. The funding funneled through MassCPR not only increased biomedical research capacity but also supported job retention within Massachusetts at a time when many organizations were furloughing workers as COVID-19-related shutdowns ensued.

As an example of how funding from the earliest philanthropic partners was leveraged to immediate effect, once an operational framework was in place and the first MassCPR awards were being granted across the community, the Massachusetts Life Sciences Center (MLSC) soon thereafter generously provided an additional $2.3 million of support for specific MassCPR projects and community resources.7 Among other areas, MLSC support bolstered COVID-19 clinical biospecimen acquisition, processing, banking, and distribution across the consortium by providing a match for MassCPR’s own allocation. This effectively doubled the support provided to the burgeoning biobanks of the Beth Israel Deaconess Medical Center, Tufts Medical Center, and Boston Medical Center; other MassCPR funds were leveraged to enhance the biobank support at Brigham and Women’s Hospital and the Ragon Institute.

As MassCPR’s central coordinating institution, Harvard raised funds which it then deployed to institutions across the entire consortium, including those with which Harvard has no formal affiliation. Such efforts stand as a testament to the power of working with a common cause as well as the value of service, of putting shared benefit ahead of individual or institutional gain.


RAPID CALL FOR PROPOSALS, AND A ROLLING GRANT-AWARDING PROCESS

On March 17, 2020, HMS announced what we believe to be the most accelerated RFP in its history (see: https://masscpr.hms.harvard.edu/rfp). With the pandemic smoldering but threatening a conflagration, applicants were given only one week to prepare and submit applications (see later). Despite this very short turnaround time, an overwhelming 448 submissions were received from investigators across Massachusetts. By funding research across the consortium, Harvard prioritized shared progress over proprietary financial interests—a necessary decision in service of advancing the scientific
understanding of the novel coronavirus so that effective vaccines, diagnostics, and therapeutics could be developed and deployed as quickly as possible.

Importantly, in addition to aligning the scientists themselves, Harvard invested in enabling technologies so that researchers had the tools needed to generate solutions and the frameworks required for a massively coordinated response. As noted earlier, scientific leadership and management ensured alignment on goals, access to platforms and services, exchange of materials and data, engagement with the scientific community through weekly WG meetings, accountability and oversight, and prudent capital allocation. In short, Harvard created a new model—under enormous time pressure and highly compromised working conditions—to mount a coordinated response that benefited all consortium members and prioritized impact over institutional interests.


Request for Proposals

The RFP stated that tenure-track faculty members at the level of assistant professor, associate professor, or professor at Harvard University, MIT, Boston University School of Medicine, Tufts University School of Medicine, University of Massachusetts Medical School, and hospitals and research institutes affiliated with these universities were eligible to apply as a lead principal investigator (PI). Proposals were allowed to include one or more co-PIs as collaborators if they were significant contributors to the project proposal. Eligibility requirements for co-PIs were the same as for the lead PI.

Additionally, senior scientists from biotechnology and pharmaceutical companies who met their firm’s PI eligibility criteria were also eligible as co-PIs. This was an important element given that the Boston biomedical ecosystem includes a great many biotech and pharma companies doing basic R&D work. Moreover, given MassCPR’s goal to hasten clinical advances, building relationships with the private sector was vital.

MassCPR leadership initially considered allocating awards to projects up to 2 years in duration. However, given the nature of the pandemic, it was quickly decided that 1-year projects at half the originally anticipated budget threshold would effectively double the number of awards that could be made. Time was of the essence, and MassCPR intended to waste none of it.

The RFP application was designed to support rapid preparation and review. Beyond typical organizational information submitted as a cover page, proposals were limited to two single-spaced pages of 11-point font with 0.7-inch margins. All figures and tables were to be included in the application body, counting toward the two-page limit. References were limited to one additional page. Each application was to include an introduction and specific aims, a detailed approach, the description of deliverables and their timeline, and a short description of plans for collaboration and communication with other members of MassCPR. No appendices were accepted, although additional pages were requested that contained biographical sketches and a basic budget using the PHS 398 Form Page 4 (see: https://grants.nih.gov/grants/funding/phs398/fp4.pdf).

To expedite the preparation and review of applications, no institutional authorizing signature was required prior to submission. However, if the application was prioritized for funding, the submitting PI was required to work with their local grants management team to finalize the budget and obtain institutional assurances and sign-off.

Institutional overhead was permitted but capped at a rate of 38%, with a request that institutions strongly consider taking no more than 15%. All grants were given as total-cost awards, that is, any institutional overhead would have to be subtracted from direct costs. If needed, Institutional Review Board (IRB) and/or Institutional Animal Care and Use Committee (IACUC) approvals were required prior to the release of funding. If permitted by the individual funding source for the award, no-cost extensions would be considered. All projects were required to submit six-month and 1-year progress reports.

Proposals were evaluated based on:



  • Potential scientific and/or clinical impact within a 1-year time frame


  • Potential to address the current, urgent needs of the COVID-19 outbreak


  • Skills and experience of the lead PI and any co-PIs and their demonstrated ability to execute the project within the funding period

Launched on March 17, 2020, the RFP submission period concluded on March 24, 2020. The administrative team reviewed all 448 proposals within 24 hours to ensure that they were complete,
submitted by eligible faculty members, and otherwise conformed to the guidance articulated within the RFP.

Review consisted of five stages—each orchestrated tightly and on a highly accelerated timeline:



  • Phase 1 (Triage): involved 12 triage reviewers with expertise in six WG areas (clinical management, diagnostics, epidemiology, pathogenesis, therapeutics, vaccines); resulted in 287 applications triaged “in”


  • Phase 2 (Preliminary Review): involved 41 expert reviewers in six WG areas; each of the 287 proposals was read by three reviewers using the National Institutes of Health 1 (Exceptional) to 9 (Poor) scoring system; resulted in 287 ranked proposals


  • Phase 3 (Study Section): involved three senior faculty from HMS, Harvard T.H. Chan School of Public Health, and MIT, who discussed the top-ranked proposals at length and finalized their initial ranking


  • Phase 4 (WG Co-Leads): involved 13 scientific co-leads of the MassCPR WGs, who prioritized the top 10 to 15 proposals relevant to each WG, reviewed and suggested 1-year budgets, and suggested possible consolidations and synergies


  • Phase 5 (Leadership Council): involved six senior scientists, including the four MassCPR EC members and two external experts from the Gates Medical Research Institute and the MLSC, who performed a final review, suggested budget adjustments, and then recommended a final group of proposals for funding with another group held in “reserve” pending the availability of additional funds

Importantly, the decision to evaluate and rank the entire set of 287 “triaged-in” applications was well reasoned. Although all the top proposals were among the best from the MassCPR RFP, the limited amount of funding available required difficult choices regarding where the pay-line would fall. As new funding was obtained by MassCPR, however, it became relatively easy to advance the pay-line on a rolling basis, given that a significant number of excellent projects had already been vetted and ranked by the review process described above.

Additionally, given that a large number of excellent proposals had been subjected to a rigorous process of evaluation, it was also possible to bundle decks or “pitches” of compelling projects within certain thematic areas for foundations and other entities to consider in light of their own funding priorities. We were also able to send prioritized lists of evaluated projects to the leadership of the applicants’ home institutions to assist with their internal ability to fundraise for pandemic-related research and clinical development. Overall, this approach permitted MassCPR to convert philanthropic and other sources of funding into research awards on a very rapid timeline.


Key Research Resources

Although the majority of submissions were anticipated to be investigator-initiated research projects, it was agreed that other types of projects would be needed to support the consortium. These were termed “key research resources” (KRR) and included patient cohorts, platforms, reagent development and distribution approaches, biospecimen acquisition and banking (as noted earlier), and other types of research infrastructure–promoting undertakings. These community-enabling resource proposals were identified by MassCPR leadership as having broad, cross-consortium impact. The solicitation of KRR projects was undertaken on the same rapid timeline as the RFP process, although it followed a somewhat different approach:



  • Phase 1 (Generation): 17 senior scientists, including the four MassCPR EC members and 13 WG co-leads, brainstormed on multiple occasions to determine KRRs that would benefit the entire consortium


  • Phase 2 (Preliminary Review): the four MassCPR EC members reviewed initial proposals submitted by WG co-leads and, with key faculty members identified as being appropriate project leaders, developed preliminary budgets for each proposal; some proposals were eliminated as not suitable for funding


  • Phase 3 (WG Review): 17 senior scientists, including the four MassCPR EC members and 13 WG co-leads, reviewed the draft list of KRRs and provided additional commentary, additions, and removals



  • Phase 4 (WG Co-Leads): the 13 scientific co-leads of the MassCPR WGs were provided an opportunity to consolidate resources and expand their applicability to multiple WGs; these were discussed as needed within WGs and with external experts


  • Phase 5 (Leadership Council): six senior scientists, including the four MassCPR EC members and two external experts (Gates Medical Research Institute and the MLSC), performed the final review and vetting of KRRs

In the first tranche of funding, the top-ranking 46 RFP proposals were awarded along with 17 KRR projects that increased overall capacity and critical infrastructure across the MassCPR consortium. This totaled 63 1-year projects representing 15 institutions (as prime awardees); a total of $17.5 million in funding was awarded. This fully committed the first tranche of funding provided to MassCPR by early supporters.

In year 2 of MassCPR, the consortium continued to track major trends within the pandemic. We devoted subsequent funds to continue and expand biobanking, sample sharing, and related activities and devoted targeted funding to study the evolving phylogeny and biology of SARS-CoV-2 mutants/variants and the burgeoning problem of PASC, that is, “Long COVID,” including the recruitment of PASC cohorts at multiple clinical sites within the consortium.

Although even a brief review of the outcomes arising from these and other MassCPR awards is beyond the scope of this manuscript, select examples will be described in the “MassCPR Productivity” section.


BIOSAMPLE ACQUISITION, BANKING, AND DISTRIBUTION

Among the first efforts organized by MassCPR was coordination of the collection and distribution of COVID-19 patient (clinical) specimens across our consortium. In the earliest days of the pandemic, the situation at our affiliated hospitals was likely the same as what could be found at any large, academic medical center elsewhere in the country: emergency rooms and intensive care units were overflowing. Patients fell across a spectrum of clinical severity, ranging from fear and concern over possible infection, to those experiencing active disease but who were otherwise stable, to others with advanced disease who were in need of ventilation and intensive care, to individuals who were near death because of the complications of terminal, multisystem infection, often in the context of an ever-growing list of comorbidities. Boston was among those cities that established an emergency field hospital to assist with managing overflowing numbers of patients.8

Researchers seeking access to clinical specimens amid such dire circumstances were, understandably, often precluded from patient contact while medical teams prioritized patient care above all else. Even in the setting of a public health emergency, researchers had to conform with ethical principles that demand proper informed consent for research subjects. Urgent, immediate patient care needs had to be weighed against the imperative to perform essential research to identify new treatments and to ensure deeper understanding of disease mechanisms. Despite the crush of individuals presenting with active infection, the flow of primary biospecimens was initially little more than a trickle to teams working to better understand the disease, develop vaccines and therapeutics, and assist in guiding the greater public health response locally, regionally, and nationally.

The ability to obtain patient-related specimens from international locations was likewise compromised by widespread travel and shipping restrictions as nations attempted to control the spread of COVID-19 into and beyond their borders. Clearly, a coordinated effort was needed. Ideally, it would entail a primary specimen acquisition approach that limited the numbers of individuals entering areas of active patient care and would present patients with a single, universally accepted consent form. Such a consent form would need to bear sufficient detail but with a requisite generality, including for the many types of specimens sought (eg, serum, sputum, whole blood, feces, and breast milk, among others), and to permit specimen use in any one of a number of needed areas. Specimen acquisition additionally had to be accomplished in a way that permitted sufficiently broad, yet coordinated, sample distribution so as to facilitate research across our entire, multi-institutional consortium. What’s more, distribution would best be managed in a way that curtailed or eliminated redundancy so that work was done quickly, efficiently, and with as little specimen wastage as possible.


Biospecimens were ultimately collected in such a manner at several clinical sites: Beth Israel Deaconess Medical Center (BIDMC), Boston Medical Center (BMC), Massachusetts General Brigham (MGB, including Massachusetts General Hospital and Brigham and Women’s Hospital), the Ragon Institute (Ragon), Tufts Medical Center (TMC), and the University of Massachusetts Medical Center (UMass). Certain MassCPR institutions were further ahead in this endeavor, whereas others were starting more from scratch, as they previously had only a small clinical biobank or even none at all.

Biosamples were shared broadly both within the collecting institutions and with other MassCPR clinical sites and nonclinical institutions, such as Boston University, the Broad Institute, Harvard Chan School of Public Health, MIT, and Tufts University. Specimens included blood (plasma, serum, peripheral blood mononuclear cells), respiratory (sputum, saliva, nasopharyngeal swabs), stool, and urine samples. Rather than creating one central repository to store all samples, a “federated” model developed in which biospecimens were retained at the collecting hospital and yet shared with investigators across the MassCPR. Because of the varied geographic areas and patient populations of each biobanking institution’s affiliated facilities, the samples gathered reflected unique, local patient populations with different socioeconomic, racial, and ethnic demographics. Thousands of clinical specimens have been distributed thus far resulting from MassCPR’s work in this area, including for projects involving diagnostic platform development, antibody-based therapeutics, T-cell responses in COVID-19, and preclinical vaccine development for the Janssen/J&J Ad26 vaccine, among many other scientific areas.

It is important to take a moment to shed additional light on how this coordinated effort was realized. Readers will recognize that tension exists within individual patient care centers when it comes to obtaining and sharing patient-derived biospecimens, in that consent forms are often narrowly defined to limit specimen use to the institutions where they are collected. Also, given the extremely high volume of patients entering clinical care centers described earlier, one could envision an added layer of disincentive for any research team that was able to obtain biomaterial to then share such precious specimens with others.

We circumvented these various obstacles as follows. First, MassCPR funded multiple studies that recruited cohorts at clinical sites, and sample sharing was a contractual requirement for accepting the funds. Awards were given with the understanding that 50% of each sample collected would be retained by the institution and the remaining 50% would be available for sharing within the consortium. This incentivized individual investigators to continue to obtain biospecimens and to share them with colleagues elsewhere across the consortium. These early patient cohorts included individuals with COVID-19 as well as uninfected high-risk persons (eg, healthcare workers).

A Sample Access Accelerator Committee (SAAC), cochaired by Howard Heller (MGH) and David Walt (BWH), was established with 17 representatives from 13 of the MassCPR institutions. The SAAC fostered collaboration by creating a common framework for obtaining, banking, and distributing COVID-19 clinical specimens in a transparent, fair, and prioritized manner across the member institutions.

Clinical specimens were all obtained via IRB-approved protocols and banked in various forms in a distributed manner across consortium member institutions, including as plasma, low-density peripheral blood mononuclear cells, buffy coats, and other less frequent specimen types as mentioned earlier.

The SAAC met monthly to review and prioritize sample requests and, if “approved,” the investigator was matched with the biorepository(ies) that could fulfill the request. A process for expedited “administrative approval” was also adopted to streamline simple or urgent requests. A uniform sample request form was developed based on the forms used at each institution and tailored for MassCPR COVID research.

To streamline sample sharing between MassCPR member institutions, we worked with the institutions providing biospecimens to create a MassCPR Material Transfer Agreement (MTA) and Data Use Agreement (DUA) template based on the Association of University Technology Managers (AUTM) template.9 The aim of the template is to facilitate the process of sharing COVID-19 biospecimens between MassCPR member institutions by standardizing terms. If an investigator requires biospecimens from multiple institutions or biorepositories to meet their research needs, they receive guidance on the required paperwork for each. Note that these templates may not apply to every material/data transfer (particularly if there is a corporate collaboration), but, in our experience, serve to expedite the process in the vast majority of cases.


Specimens were distributed to MassCPR investigators for a variety of studies, ranging from the creation or improvement of diagnostic platforms to the development of antibody-based therapeutics, to studies investigating immunologic responses in SARS-CoV-2 infection.

To reduce duplication of research efforts and conserve the limited COVID-19 biosamples, a set of basic operating principles was adopted:



  • When applicable, investigators were recommended to seek biosamples from their (or their coinvestigator’s) “home” institution before requesting samples from MassCPR.


  • Information in MassCPR sample request forms could be shared confidentially with MassCPR WG experts for scientific review and/or with other COVID-19 biorepository sample access committees at MassCPR member institutions.


  • To facilitate collaboration, project titles and a brief summary of all studies funded by MassCPR and/or that involved use of MassCPR samples were posted and available to MassCPR members via the MassCPR intranet.


  • Data obtained from the use of MassCPR biosamples were required to be made available to other members of MassCPR in a timely manner (via the MassCPR intranet or other established data repositories) and at least by the time the data were submitted for publication.


  • Requests for additional samples for the same research project were required to be submitted to the MassCPR SAAC and to include preliminary results obtained from research using an initial set of MassCPR or member institution biosamples.


  • In practice, when a large number of samples was requested (>100), the approval might be limited to an initial pilot study to generate preliminary data or proof of concept before a large number or quantity of samples was distributed.

The SAAC served additional roles as cross-institutional collaborations proceeded at a rapid pace, including:



  • Serving as a “matchmaker” for investigators who had similar or complementary research projects


  • Connecting non-MassCPR investigators with MassCPR collaborators


  • Advising on select proposed studies, drawing on the several areas of expertise among SAAC members


  • Helping to eliminate waste of precious biosamples by identifying areas of redundant or duplicated proposals

To facilitate a broader view of COVID biobanking endeavors, a separate, regular meeting was established that included participation by the leaders of the biobanking efforts at each of the clinical sites. This enabled sharing of “best practices” and information about biosamples that were being collected beyond those included in the MassCPR-funded cohorts, including from pediatric or pregnant patients.

The work of the SAAC can be summarized in the following set of statistics (as of January 31, 2023):



  • Number of subjects enrolled in the initial MassCPR-funded cohorts: 1,899


  • Total number of collected biosamples in the distributed inventory: 88,409


  • Number of biosamples distributed by the SAAC: 4,077


  • Number of investigator requests fulfilled: 61


  • Number of institutions receiving specimens from MassCPR biobanks: 14

Although biosample collections continue for some subjects who were enrolled in the original cohorts, the current MassCPR focus is prioritized on the study of viral variants and PASC. Efforts are led by the PIs of those two areas along with the four PIs of the MassCPR biospecimen program. They lead the charge to continue and coordinate biobanking efforts and to further develop the linking of clinical data and standard assays with the biosamples.

In addition to our work collecting, processing, storing, distributing, and tracking biospecimens across the MassCPR, we are beginning to devote attention and resources to the characterization of many of the collected biospecimens via a set of “standard assays” so that investigators will be able
to ask and answer more detailed questions about SARS-CoV-2 pathogenesis and the clinical management of COVID-19 disease. These standard assays will include measurement of antibody levels, cytokine profiles, and viral load.

Among the challenges that arose during these efforts was the fact that various institutions had different interpretations of the appropriate SARS-CoV-2 biosafety containment level (BSL) for nonrespiratory samples. Some were stricter than others and required viral inactivation before specimens were permitted on their campus. This proved problematic for certain tissues such as peripheral blood mononuclear cells.

Also, early biobanking efforts were almost exclusively from sick inpatients or healthcare workers. It took time to understand that mild disease also needed to be studied as clinicians noted different disease sequelae in patients with milder disease who remained in the community. It was an additional challenge to then resolve how to recruit and obtain samples from outpatients whom we preferred not to come to the hospital.

We further anticipated a need to expand biospecimen sampling beyond standard serum/plasma/DNA biobanking while not knowing initially which samples were going to be relevant for future studies. We opted to start collecting a larger number of specimen types while recognizing the need to continually reassess and narrow the types of samples that our biobanks were storing. As we reassessed biobank resource allocation, some specimen collections were stopped (eg, urine) and others remained but were deprioritized (eg, stool). The convening function of our SAAC proves useful for check-ins on such subjects, including to maintain awareness of and communications with “niche” biobanks that are not part of MassCPR but that support other special consortia, such as those in perinatal and pediatric areas.

Unfortunately, but somewhat fortuitously, the outbreak of monkeypox (mpox) has provided a reaffirming demonstration of the durable utility of the biosample sharing approaches and framework established by the MassCPR. The first U.S. case of mpox was reported on May 18, 2022, at Massachusetts General Hospital,10 and within 48 hours, biosamples were available for study at both the Ragon Institute and the Boston University NEIDL. This time frame would simply not have been possible in prepandemic times.


PUBLIC BRIEFINGS, MEDIA BRIEFINGS, SCIENTIFIC SYMPOSIA, AND MEDICAL GRAND ROUNDS

In addition to the formation and operation of a rigorous academic enterprise combating the pandemic, we quickly realized that there was a great need to inform the public. Indeed, there was considerable COVID-related misinformation and disinformation being spread, and information supported by credible science was needed. MassCPR faculty members became a consistent source of information for journalists (see: https://masscpr.hms.harvard.edu/news), but MassCPR leadership perceived a different sort of information gap that they hoped to ameliorate.

In response to the public’s need for authoritative, pandemic-related information, MassCPR has sponsored numerous public briefings seeking to demystify testing, vaccines, and coronavirus variants, among many other topics. Our public briefings are open to anyone with a computer and an internet connection. MassCPR convenes two general types of offerings: public briefings and scientific seminars/symposia.

Public briefings are intended for an interested but nonscientific audience. They seek to inform and educate news media, our supporters, and the scientifically curious public about what MassCPR is doing to address the COVID-19 pandemic and future outbreaks and to provide thought leadership on a range of coronavirus-related topics. Our overarching hope is that these sessions inform, educate, and engage the public and news media and help to elevate public understanding of COVID-19-related subjects.

Scientific seminars/symposia are similar to public briefings, although they tend to be more narrowly drawn for the benefit of a primarily (professional) scientific and medical audience. However, like public briefings, the sessions remain open to “all comers,” meaning internal and external audiences, members of the scientific and medical community around the world, the general public, journalists, policy-makers, and additional individuals with a wide variety of motivations and interests. Events are recorded to facilitate access at later times.

These MassCPR events include small panels of speakers drawn from the broader MassCPR community as well as other contributors including those at research institutes located abroad. MassCPR has also welcomed clinical care providers in other areas of the globe to speak, people with deep experience in managing the COVID-19 pandemic in Africa, Asia, Europe, South America, and other regions.


Each speaker is invited to address a key facet of the session’s overall theme. Speakers use a limited number of slides, and each talk is brief, lasting 6 to 8 minutes in total. There is a rigorous 30-minute question-and-answer (Q/A) period at the end of each session in which participants and additional subject matter experts, who are invited to assist with Q/A, field questions live, both on-screen and in the chat or Q/A function depending on the format of the session. For the public briefings in particular, the 30-minute Q/A is often in the form of a “presser” in which members of the science/medical journalism community are given priority access to experts from across MassCPR to assist with the dissemination of scientifically and medically grounded information.

In the third year of the pandemic, regular media briefings were added to these MassCPR offerings. Hosted by one of the faculty co-leads of MassCPR (Bruce Walker, Ragon Institute) and the co-leads of the Viral Variants WG (Jacob Lemieux, MGH, and Jeremy Luban, UMass), media briefings are typically attended by 25 to 30 members of the local, regional, national, and international news media. Each briefing is organized around a specific theme, such as the evolution of the pandemic, COVID in pediatric populations, or the latest in COVID vaccines and therapeutics. Two MassCPR faculty experts in the thematic area are invited to participate. The format of the media briefings includes a “weather report” describing the current state of the pandemic, brief presentations by the expert participants, and extensive Q/A. The repeated attendance by many of the same journalists from prominent media outlets is a testament to the value they place on these sessions.

Prior to each public or media briefing, a “practice session” is convened for each presenter in which they make a “dry run” of their talk, including slides, and receive dedicated feedback from MassCPR leadership, peer presenters, public communications experts, and others regarding their figures/graphics, explanations, use of jargon, and other areas, all intended to make their presentations more accessible and informative to a wider audience. Each of these premeeting sessions has been a veritable master class in presentation organization and tactics.

To date, MassCPR has hosted more than a dozen public briefings and more than a dozen media briefings on topics ranging from COVID diagnostics and how they work, to healthcare disparities in COVID, to vaccines and therapeutics, and more. MassCPR sessions have reached people from 80 different countries (Figure 18.4) as interested individuals have signed on to participate in these virtual talks live. Many thousands of people have tuned-in live to our simultaneously closed-captioned briefings as well as watched them on YouTube. This highlights the truly global nature of COVID-19 and the need for people everywhere to be better informed as they deal with the pandemic and its consequences.






MassCPR public briefings and scientific seminars/symposia have included (in chronological order):



  • A coordinated, Boston-wide response—March 12, 2020


  • MassCPR clinical/research specimens discussion—April 16, 2020


  • SARS-CoV-2 antibodies—April 17, 2020


  • SARS-CoV-2 virus detection methods—May 1, 2020


  • COVID-19 therapeutics and clinical management—May 8, 2020


  • MassCPR public briefing—May 15, 2020


  • The ongoing challenges of reopening—June 26, 2020


  • Vaccines and animal models—July 14, 2020


  • Vaccines: the ultimate quest in COVID-19—July 28, 2020


  • Unequal destroyer: COVID-19 health disparities and the search for solutions—September 23, 2020


  • COVID-19 vaccines are coming, now what?—December 9, 2020


  • COVID-19 diagnostic testing and clinical management—March 30, 2021


  • COVID-19 vaccines and pathogenesis—March 31, 2021


  • COVID-19 2.0: demystifying SARS-CoV-2 variants—February 24, 2021


  • COVID-19 in pregnancy and childhood—April 29, 2021


  • Illuminating our path forward: lessons from an evolving pandemic—October 24, 2022



For additional information about MassCPR events or to view previously offered (recorded) sessions, see: https://masscpr.hms.harvard.edu/events.

Additionally, to support a forum that brings together as many patient care providers as possible across the entire cadre of HMS-affiliated teaching hospitals, beginning in April of 2020, MassCPR has been among the organizations invited to support a combined (BIDMC, BWH, and MGH) Harvard Medical Grand Rounds. This series specifically connects the large HMS-affiliated hospital and physician networks of Beth Israel Lahey Health and Mass General Brigham, although any interested physician is able to join regardless of their place of employment. These rounds have run on a weekly to monthly basis to the present day.

In July 2021, MassCPR leadership partnered with the HMS Office of External Education to give additional thought to how best to convey effective, evidence-based medical information to a wider, including international, audience. From these conversations, a group of short clinical educational videos were developed to provide information that would be directly useful to care providers around the globe. Importantly, these videos are freely available—no payment or registration is required to view them. The closed-captioning portion of each video has been translated into languages other than English, including Arabic, French, Hindi, Portuguese, Spanish, and Swahili. Some of the videos have also been translated into Hindi during the spoken portion (see: https://postgraduateeducation.hms.harvard.edu/covid-19-clinical-education-series).

The overarching topics and subtopics of these videos are:



  • Prevention and Infection Control



    • COVID-19 Vaccines


    • Risk Factors for Severe COVID-19 Infection


    • Infection Control to Prevent Hospital Transmission


    • COVID-19 in the Primary Care Setting


  • Diagnosis and Initial Evaluation



    • Diagnostic Testing for COVID-19


    • Initial Risk Assessment and Stratification: “Who Should We Be Worried About”


    • Omicron Variants


  • Treatment of COVID-19



    • Treatment of COVID-19


    • Medications for Outpatients With COVID-19: What Works, What Doesn’t


    • Home Isolation


  • Critically Ill Patients



    • Initiating Mechanical Ventilation


    • Basics of Mechanical Ventilation for Respiratory Failure From COVID-19 Pneumonia


    • Hypoxemia in COVID-19


  • Oxygen Devices



    • High-Flow Nasal Cannula


    • Noninvasive Ventilation Devices (BPAP-CPAP)


    • COVID-19 Outpatient Pulse Oximetry and Oxygen Management


  • Clinical Complications



    • COVID-19 Video Series: Clarifying Evidence-Based Information


    • “Black Fungus”—Mucormycosis: Diagnosis, Risk Factors, Treatment


    • Neuromuscular Complications of Severe COVID-19


  • Special Populations



    • COVID-19 and Pregnancy


    • Key Considerations of SARS-CoV-2 in Children



  • Decision-Making and Leadership in the COVID-19 Pandemic



    • Decision-Making in the Setting of a Pandemic: A Medical Director’s Perspective


  • Additional Topics in COVID-19



    • Where to Look for Reliable Guidelines, Interpreting Evidence


    • Mental Health of Providers Caring for COVID Patients


    • Mental Health of Providers Caring for COVID Patients (Intensive Care Unit [ICU] Viewpoint)


MASSCPR PRODUCTIVITY

Although many medical schools and academic medical centers tend to organize around similar themes relating to patient care and areas of scientific inquiry that support therapeutic and clinical practice improvements, each of MassCPR’s partnering institutions contributes individual and collective strengths to the consortium. For example, Boston University and the NEIDL bring to the consortium considerable expertise in BSL3/4 and cognate animal biosafety containment-level investigation.11 Additionally, as the largest safety-net hospital in New England, Boston Medical Center has access to patient populations whose participation in research and clinical trials is important to ensuring equitable representation in and access to cutting-edge healthcare advances.

MIT has a wealth of faculty exploring basic science and technology development that advance understanding of human disease and that seek to improve health through scientific and engineering approaches.12 Tufts University contributes significantly; importantly, its Cummings School of Veterinary Medicine is New England’s only school of veterinary medicine, contributing highly relevant animal models of disease to the development of vaccines (eg, reference13). The UMass Chan Medical School has considerable skill in structural biology, immunology, and virology (eg, references14,15) as well as broad access to patient specimens from locations across the region given its geographical location to the west of the Boston area in Central Massachusetts. These are but a few examples of the wide array of important contributions arising from each of these institutions within MassCPR.

Determining the productivity or “success” of an endeavor like MassCPR is challenging, in part because of the rapidity with which it was established and the fact that it has existed for only three years. The immediate importance and utility of some outcomes was obvious, one example being the work of MassCPR awardee Rebecca M. Baron (BWH) and her colleagues to develop rapidly deployable ventilator splitters to assist with accommodating COVID-19 patient surges.16

Typical institutional productivity metrics such as numbers of students and post-docs trained, faculty promoted, grant funding received, start-up companies launched, and patents filed for/granted, among other measures, are insufficient criteria for evaluating a novel research consortium like MassCPR. However, one classic metric of academic productivity, papers published, proved to be quite illuminating.

We performed a bibliometric analysis of MassCPR-funded investigators using publicly available publication information contained in PubMed (https://pubmed.ncbi.nlm.nih.gov/) at two different time points—August of 2021 and again in June of 2022. PubMed was queried using the search string “last name (+) initials” (and) “COVID” (or “SARS”) and (home institution keyword, eg, “Harvard” or “NEIDL”). No preprints were included in the analysis in order to eliminate duplicates, as PubMed tends to include both preprints and the ultimately peer-reviewed versions of the same work. Also, although preprints became an important vehicle for disseminating research results across the community in a rapid manner during the pandemic, the data contained therein do not always survive the peer-review process intact. Papers with multiple MassCPR authors were counted only once following a manual review of all search results. Using this approach, we found that, between March of 2020 and August of 2021, MassCPR-funded investigators published 253 papers (via unique PubMed identification numbers or PMIDs). This total increased to 509 papers by June of 2022 (Figure 18.5).







Examples of productivity among the 509 publications (March 2020 through June 2022) are the following numbers of papers appearing in journals with impact factors greater than 20 (N.B., each journal’s impact factor was assessed as of January 2023):

Apr 2, 2025 | Posted by in PUBLIC HEALTH AND EPIDEMIOLOGY | Comments Off on MassCPR: Research Collaboration to Confront a Pandemic

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